Prediction of the Potential of Benzoxazinone, 2-phenyl-4H-benzo[1,3]oxazin-4-one, and 2-[2-(4-methoxyphenyl)vinyl]-3,1-benzoxazin-4-one as New Anti-Tuberculosis
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Even though it had been almost five decades, the decline in the prevalence of tuberculosis had still been low due to the rise of drug resistance. Recently, benzoxazinone compounds had begun to gain potential as anti-tuberculosis agents because of their interesting structure and similarity to isoniazid, the most widely used TB drug, which had reportedly experienced many cases of resistance. This research tested the ability of the core compound benzoxazinone and its two derivatives to bind to the enoyl ACP-CoA receptor, which was responsible for the formation of mycobacterial walls. In silico tests were carried out using pkcsm to determine the pharmacokinetic profile, and molecular docking tests using Molegro Virtual Docker were conducted to determine the pharmacodynamic profile through binding to the enoyl ACP-CoA receptor. The selected receptors were downloaded from the protein data bank with the code 2IDZ. The research results showed that the three test compounds had good intestinal and skin absorption profiles, indicating that they could be administered orally or transdermally. The docking results, expressed by moldock score and rerank score, showed that the three test compounds had better potential compared to isoniazid. Thus, the test compounds could be developed as new anti-tuberculosis agents.
Keywords: Tubercolosis, Benzoxazinone, Mycobacterium Tuberculosis, Pkcsm, Molegro Virtual Docker
Bastos, M. L., Hussain, H.,Weyer, K., Garcia-Garcia, L., Leimane, V., Leung, C. C. et al. (2014) ‘Treatment outcomes of patients with multidrug-resistant and extensively drug-resistant tuberculosis according to drug susceptibility testing to first- and second-line drugs: An individual patient data meta-analysis', Clinical Infectious Diseases, 59(10). doi: 10.1093/cid/ciu619.
Begley, C., Amaraneni, A. and Lutwick, L. (2015) ‘Mycobacterium avium-intracellulare brain abscesses in an HIV-infected patient', IDCases, 2(1). doi: 10.1016/j.idcr.2014.11.002.
Bitencourt-Ferreira, G. and de Azevedo, W. F. (2019) ‘Molegro virtual docker for docking', in Methods in Molecular Biology. doi: 10.1007/978-1-4939-9752-7_10.
Dahlgren, D. and Lennernäs, H. (2019) ‘Intestinal permeability and drug absorption: predictive experimental, computational and in vivo approaches', Pharmaceutics, 11(8), pp. 411–420. doi: 10.3390/pharmaceutics11080411.
David, H. L. (1970) ‘Probability distribution of drug-resistant mutants in unselected populations of Mycobacterium tuberculosis.', Applied microbiology, 20(5). doi: 10.1128/aem.20.5.810-814.1970.
Dias, M. V. B., Vasconcelos, I. B., Prado, A.M.X., Fadel, V., Basso, L. A., de Azevedo, W. F., et al. (2007) ‘Crystallographic studies on the binding of isonicotinyl-NAD adduct to wild-type and isoniazid resistant 2-trans-enoyl-ACP (CoA) reductase from Mycobacterium tuberculosis', Journal of Structural Biology, 159(3), pp. 369–380. doi: 10.1016/j.jsb.2007.04.009.
Ekowati, J., Diyah, N.W., Nofianti, K.A., Hamid, I.S., Siswandono. (2018) ‘Molecular docking of ferulic acid derivatives on P2Y12 receptor and their ADMET prediction', Journal of Mathematical and Fundamental Sciences, 50(2). doi: 10.5614/j.math.fund.sci.2018.50.2.8.
Jang, G. J. and Chung, J. H. (2020) ‘Diagnosis and treatment of multidrug-resistant tuberculosis', Yeungnam Univ J Med, 37(4), pp. 277–285. doi: 10.12701/yujm.2020.00626.
Kanfer, I. and Shargel, L. (2020) ‘Approved Drug Products with Therapeutic Equivalence Evaluations (The Orange Book)', in Generic Drug Product Development. doi: 10.3109/9781420020014-4.
Kendall, E. A., Fofana, M. O. and Dowdy, D. W. (2015) ‘Burden of transmitted multidrug resistance in epidemics of tuberculosis: A transmission modelling analysis', The Lancet Respiratory Medicine, 3(12), pp. 963–972. doi: 10.1016/S2213-2600(15)00458-0.
Khan, S. R., Manialawy, Y. and Siraki, A. G. (2019) ‘Isoniazid and host immune system interactions: A proposal for a novel comprehensive mode of action', British Journal of Pharmacology, 176(24). doi: 10.1111/bph.14867.
Kim, S. J. (2005) ‘Drug-susceptibility testing in tuberculosis: Methods and reliability of results', European Respiratory Journal, 25(3). doi: 10.1183/09031936.05.00111304.
Krátkí½, M., Vinová, J., Novotná, E., Mandíková, J., Wsól, V., Trejtnar, F., et al. (2012) ‘Salicylanilide derivatives block Mycobacterium tuberculosis through inhibition of isocitrate lyase and methionine aminopeptidase', Tuberculosis, 92(5), pp. 434–439. doi: 10.1016/j.tube.2012.06.001.
Li, X., Liu, N., Zhang, H., Knudson, E., Slayden, R.A. Tonge, P. J. et al. (2010) ‘Synthesis and SAR studies of 1,4-benzoxazine MenB inhibitors: Novel antibacterial agents against Mycobacterium tuberculosis', Bioorganic and Medicinal Chemistry Letters, 20(21), pp. 6306–09. doi: 10.1016/j.bmcl.2010.08.076.
Mohajan, H. K. (2015) ‘Tuberculosis is a Fatal Disease among Some Developing Countries of the World', American Journal of Infectious Diseases and Microbiology, 3(1), pp. 18–31.
Mpagama, S. G., Ezekiel, M. J., Mbelele, P. M., Chongolo, A.M., Kibiki, G. S., de Guex, K.P., et al. (2020) ‘Gridlock from diagnosis to treatment of multidrug resistant tuberculosis (MDR-TB) in Tanzania: patients' perspectives from a focus group discussion', BMC Public Health, 20(1). doi: 10.1186/s12889-020-09774-3.
Mulyawan, I. K. (2023) Ayo Bersama Akhiri TBC, Indonesia Bisa, Dinas Kesehatan NTB. Available at: https://dinkes.ntbprov.go.id/artikel/ayo-bersama-akhiri-tbc-indonesia-bisa/ (Accessed: 28 February 2024).
Nofianti, K. A. and Ekowati, J. (2020) ‘O-Hydroxycinnamic derivatives as prospective anti-platelet candidates: In silico pharmacokinetic screening and evaluation of their binding sites on COX-1 and P2Y12 receptors', Journal of Basic and Clinical Physiology and Pharmacology, 30(6). doi: 10.1515/jbcpp-2019-0327.
Nofianti, K. A., Ekowati, J. and Astika, I. G. N. (2009) ‘Pengaruh lama pemanasan pada sintesis 2-[2-(4-metoksi-fenil)-vinil]-benzo[1.3]oxazin-4-on', Majalah Farmasi Airlangga, 7(2), pp. 25–30. Available at: https://journal.unair.ac.id/MFA@pengaruh-lama-pemanasan-pada-sintesis-2-[2-(4-metoksi-fenil)-vinil]-benzo[1.3]oxazin-4-on-article-3658-media-13-category-15.html.
Oga-Omenka, C., Tseja-Akinrin, A., Sen, P., Mac-Seing, M., Agbaje, A., Menzies, D., Zarowsky, C. et al. (2020) ‘Factors influencing diagnosis and treatment initiation for multidrug-resistant/rifampicin-resistant tuberculosis in six sub-Saharan African countries: A mixed-methods systematic review', BMJ Global Health, 5(7). doi: 10.1136/bmjgh-2019-002280.
Pires, D. E. V., Blundell, T. L. and Ascher, D. B. (2015) ‘pkCSM: Predicting small-molecule pharmacokinetic and toxicity properties using graph-based signatures', Journal of Medicinal Chemistry, 58(9), pp. 4066–4072. doi: 10.1021/acs.jmedchem.5b00104.
Rosita, A. P. (2019) ‘Molekular Docking Dengan Metode Molegro Virtual Docker Turunan Kalkon Sebagai Antimikroba', STOMATOGNATIC-Jurnal Kedokteran Gigi, 9(1), pp. 39–47.
Shargel, L., Wu-Pong, S. and Yu, A. B. C. (2012) Applied Biopharmaceutics & Pharmacokinetics, Applied Biopharmaceutics & Pharmacokinetics, 6e.
Tekade, R. K. (2018) Basic fundamentals of drug delivery, Basic Fundamentals of Drug Delivery. doi: 10.1016/C2018-0-03215-6.
Vilchèze, C., Morbidoni, H.R., Weisbrod, T.R., Iwamoto, H.,Kuo, M., Sacchettini, J.C. et al. (2000) ‘Inactivation of the inhA-encoded fatty acid synthase II (FASII) enoyl- acyl carrier protein reductase induces accumulation of the FASI end products and cell lysis of Mycobacterium smegmatis', Journal of Bacteriology, 182(14), pp. 4059–67. doi: 10.1128/JB.182.14.4059-4067.2000.
Watanabe, R., Esaki, T., Kawashima, H., Natsume-Kitatani, Y., Nagao, C., Ohashi, R. et al. (2018) ‘Predicting Fraction Unbound in Human Plasma from Chemical Structure: Improved Accuracy in the Low Value Ranges', Molecular Pharmaceutics, 15(11), pp. 5302–5311. doi: 10.1021/acs.molpharmaceut.8b00785.
WHO (2019) WHO consolidated guidelines on drug-resistant tuberculosis treatment. Geneva: World Health Organization; Geneva.
Zampieri, D., Mamolo, M.G.,Filingeri, J., Fortuna, S., De Logu, A., Sanna, A., Zanon, D. et al. (2019) ‘Design, synthesis and antimycobacterial activity of benzoxazinone derivatives and open-ring analogues: Preliminary data and computational analysis', Bioorganic & Medicinal Chemistry Letters, 29(17), pp. 2468–2474. doi: https://doi.org/10.1016/j.bmcl.2019.07.025.
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