Main Article Content
Abstract
Highlights:
1. The unexplored soil of mangrove ecosystems in Surabaya, Indonesia, has the potential to be home to biodiversity,
including Streptomyces sp. that can produce antibiotics.
2. Streptomyces sp. has antibacterial properties against Gram-positive and Gram-negative bacteria, and the duration of
incubation plays a critical role in regulating the antibacterial activity.
Abstract
A mangrove ecosystem in Surabaya, Indonesia, has a high salinity, pH, potassium, phosphorus, and nitrate contents. This ecosystem comprises a mixture of sand, dust, mud, and clay, which has the potential to be a conducive environment for the isolation of Streptomyces. The importance of Streptomyces in biotechnology lies in its ability to produce bioactive secondary metabolites, which represent a valuable reservoir of antibiotics. This research aimed to assess the antibiotic activity exhibited by Streptomyces sp. isolated from the soil of a mangrove ecosystem in Wonorejo, Surabaya, Indonesia. The analysis focused on the potential of Streptomyces sp. to produce antibiotics that work against Gram-positive bacteria (i.e., Staphylococcus aureus ATCC 25923 and Bacillus subtilis) as well as Gram-negative bacteria (i.e., Escherichia coli ATCC 25922, Pseudomonas aeruginosa ATCC 27853, and Salmonella Typhimurium). The antibacterial activity test was conducted using the modified agar diffusion method. Observations were performed to identify any clear zone formation around the Streptomyces sp. agar colonies with a diameter of 0.8 cm and a height of 3 mm. The clear zone diameter was measured every 24 hours during the 10-day incubation period to assess the diversity of antibacterial activity. The antibacterial profile of Streptomyces sp. exhibited varying levels of activity against different bacterial strains in the tests conducted. The inhibition zone diameters demonstrated the highest levels of activity in Bacillus subtilis (15.9 mm) on day 7, Staphylococcus aureus (27.6 mm) on day 2, Pseudomonas aeruginosa (24.3 mm) on day 7, Escherichia coli (29.2 mm) on day 5, and Salmonella Typhimurium (27.5 mm) on day 7. The results indicated that Streptomyces sp. had inhibitory effects against Gram-positive bacteria as well as Gram-negative bacteria. In conclusion, Streptomyces sp. is a source of biodiversity found in the soil of mangrove ecosystems and has the ability to produce antibiotics.
Keywords
Article Details
Copyright (c) 2023 Folia Medica Indonesiana
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
-
Folia Medica Indonesiana is a scientific peer-reviewed article which freely available to be accessed, downloaded, and used for research purposes. Folia Medica Indonesiana (p-ISSN: 2541-1012; e-ISSN: 2528-2018) is licensed under a Creative Commons Attribution 4.0 International License. Manuscripts submitted to Folia Medica Indonesiana are published under the terms of the Creative Commons License. The terms of the license are:
Attribution ” You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
NonCommercial ” You may not use the material for commercial purposes.
ShareAlike ” If you remix, transform, or build upon the material, you must distribute your contributions under the same license as the original.
No additional restrictions ” You may not apply legal terms or technological measures that legally restrict others from doing anything the license permits.
You are free to :
Share ” copy and redistribute the material in any medium or format.
Adapt ” remix, transform, and build upon the material.
References
- Adel A, Houda M, Djamila KG (2016). Evaluation of antifungal activity of novel marine actinomycete, Streptomyces sp. AA13 isolated from sediments of Lake Oubeira (Algeria) against Candida albicans. African Journal of Microbiology Research 10, 156–171. doi: 10.5897/AJMR2013.7765.
- Al-Ansari M, Alkubaisi N, Vijayaragavan P, et al (2019). Antimicrobial potential of Streptomyces sp. to the Gram positive and Gram negative pathogens. Journal of Infection and Public Health 12, 861–866. doi: 10.1016/j.jiph.2019.05.016.
- Al-Dhabi NA, Ghilan A-KM, Arasu MV, et al (2018). Green biosynthesis of silver nanoparticles produced from marine Streptomyces sp. Al-Dhabi-89 and their potential applications against wound infection and drug resistant clinical pathogens. Journal of Photochemistry and Photobiology B: Biology 189, 176–184. doi: 10.1016/j.jphotobiol.2018.09.012.
- Al-Dhabi NA, Mohammed Ghilan A-K, Esmail GA, et al (2019). Bioactivity assessment of the Saudi Arabian Marine Streptomyces sp. Al-Dhabi-90, metabolic profiling and its in vitro inhibitory property against multidrug resistant and extended-spectrum beta-lactamase clinical bacterial pathogens. Journal of Infection and Public Health 12, 549–556. doi: 10.1016/j.jiph.2019.01.065.
- Alongi DM (2020). Nitrogen cycling and mass balance in the world's mangrove forests. Nitrogen 1, 167–189. doi: 10.3390/nitrogen1020014.
- Balasubramanian B, Benit N, Agastian P, et al. (2021). Carbapenemases producing Klebsiella pneumoniae from the pus of hospitalized patients: In-vitro antibiotic properties of Streptomyces against multidrug resistant infectious bacteria. Journal of Infection and Public Health 14, 892–897. doi: 10.1016/j.jiph.2021.05.006.
- Baskaran B, Muthukumarasamy A (2017). Isolation, characterisation and enzymatic activity of Streptomyces sp. and its pH control during fermentation process. IET Systems Biology 11, 114–118. doi: 10.1049/iet-syb.2016.0048.
- Chater KF (2016). Recent advances in understanding Streptomyces. F1000Research 5, 2795. doi: 10.12688/f1000research.9534.1.
- Chrisyariati I, Hendrarto B, Suryanti (2014). Kandungan nitrogen total dan fosfat sedimen mangrove pada umur yang berbeda di lingkungan pertambakan Mangunharjo, Semarang. Management of Aquatic Resources Journal (MAQUARES) 3, 65–72. doi: 10.14710/marj. v3i3.5623.
- Constance A, Oehri J, Bunbury N, et al (2022). Soil nutrient content and water level variation drive mangrove forest aboveground biomass in the lagoonal ecosystem of Aldabra Atoll. Ecological Indicators 143, 109292. doi: 10.1016/j.ecolind. 2022.109292.
- Fathoni, MM, Isnaeni I, Darmawati, A. (2021) Anti-bacterial activity of rosela flower extract (Hibiscus sabdariffa L.) against extended-spectrum beta-lactamase (ESBL) Eschericia coli. Berkala Ilmiah Kimia Farmasi 8, 7–13. doi: 10.20473/bikfar.v8i1.31204.
- Frederika YC, Ihsan YN, Riyantini I (2021). Nutrient profile and mangrove vegetation composition in the Coastal waters of Indramayu. Spermonde: Jurnal Ilmu Kelautan. doi: 10.20956/jiks.v7i1.12879.
- Girkin J (2019). A practical guide to optical microscopy. CRC Press. Available at: https://www.taylorfrancis.com/books/9781351630368.
- Karthik Y, Kalyani MI (2023). Occurrence of Streptomyces tauricus in mangrove soil of Mangalore region in Dakshina Kannada as a source for antimicrobial peptide. Journal of Basic Microbiology 63, 389–403. doi: 10.1002/jobm.202200108.
- Kumar PS, Duraipandiyan V, Ignacimuthu S (2014). Isolation, screening and partial purification of antimicrobial antibiotics from soil Streptomyces sp. SCA 7. The Kaohsiung Journal of Medical Sciences 30, 435–446. doi: 10.1016/j.kjms.2014.05.006.
- Madigan MT, Bender KS, Buckley DH, et al (2019). Brock Biology of Microorganisms15th edition, 15th edn. Pearson.
- Manteca Á, Yagüe P (2018). Streptomyces differentiation in liquid cultures as a trigger of secondary metabolism. Antibiotics 7, 41. doi: 10.3390/antibiotics7020041.
- Martinez JPF, Rodriguez DG, Garcia ER, et al (2014). Streptomycin hydrazone derivatives: Synthesis and molecular recognition in aqueous solution. Natural Product Communications 9, 1449-1455. doi:10.1177/1934578X1400901012.
- Moradali MF, Ghods S, Rehm BHA (2017). Pseudomonas aeruginosa lifestyle: A paradigm for adaptation, survival, and persistence. Frontiers in Cellular and Infection Microbiology. doi: 10.3389/fcimb.2017.00039.
- Palla MS, Guntuku GS, Muthyala MKK, et al (2018). Isolation and molecular characterization of antifungal metabolite producing actinomycete from mangrove soil. Beni-Suef University Journal of Basic and Applied Sciences 7, 250–256. doi: 10.1016/j.bjbas.2018.02.006.
- Percival SL, Williams DW (2014). Escherichia coli. In Microbiology of Waterborne Diseases, pp. 89–117. Elsevier. Available at: https://linkinghub. elsevier.com/retrieve/pii/B9780124158467000068.
- Rütten A, Kirchner T, Musiol-Kroll EM (2022). Overview on strategies and assays for antibiotic discovery. Pharmaceuticals 15, 1302. doi: 10.33 90/ph15101302.
- Ryandini D, Radjasa OK, Oedjijono (2021). Bioactive compounds derived from Streptomyces sp. SA32: antibacterial activity, chemical profile, and their related genes. IOP Conference Series: Earth and Environmental Science 948, 012062. doi: 10.1088/1755-1315/948/1/012062.
- Sukojo BM, Arindi YN (2019). Study of potentials economic valuation of mangrove ecosystem for coastal communities using satellite imagery (case study: East Coastal Surabaya). IOP Conference Series: Earth and Environmental Science 389, 012013. doi: 10.1088/1755-1315/389/1/012013.
- Syamsu IF, Nugraha A zaky, Nugraheni CT, et al (2018). Kajian perubahan tutupan lahan di ekosistem mangrove pantai timur Surabaya. Media Konservasi 23, 122–131. doi: 10.29244/medkon.23.2.122-131.
- Tong SYC, Davis JS, Eichenberger E, et al. (2015). Staphylococcus aureus infections: Epidemiology, pathophysiology, clinical manifestations, and management. Clinical Microbiology Reviews 28, 603–661. doi: 10.1128/CMR.00134-14.
- Worthington TA, zu Ermgassen PSE, Friess DA, et al (2020). A global biophysical typology of mangroves and its relevance for ecosystem structure and deforestation. Scientific Reports10, 14652. doi: 10.1038/s41598-020-71194-5.
References
Adel A, Houda M, Djamila KG (2016). Evaluation of antifungal activity of novel marine actinomycete, Streptomyces sp. AA13 isolated from sediments of Lake Oubeira (Algeria) against Candida albicans. African Journal of Microbiology Research 10, 156–171. doi: 10.5897/AJMR2013.7765.
Al-Ansari M, Alkubaisi N, Vijayaragavan P, et al (2019). Antimicrobial potential of Streptomyces sp. to the Gram positive and Gram negative pathogens. Journal of Infection and Public Health 12, 861–866. doi: 10.1016/j.jiph.2019.05.016.
Al-Dhabi NA, Ghilan A-KM, Arasu MV, et al (2018). Green biosynthesis of silver nanoparticles produced from marine Streptomyces sp. Al-Dhabi-89 and their potential applications against wound infection and drug resistant clinical pathogens. Journal of Photochemistry and Photobiology B: Biology 189, 176–184. doi: 10.1016/j.jphotobiol.2018.09.012.
Al-Dhabi NA, Mohammed Ghilan A-K, Esmail GA, et al (2019). Bioactivity assessment of the Saudi Arabian Marine Streptomyces sp. Al-Dhabi-90, metabolic profiling and its in vitro inhibitory property against multidrug resistant and extended-spectrum beta-lactamase clinical bacterial pathogens. Journal of Infection and Public Health 12, 549–556. doi: 10.1016/j.jiph.2019.01.065.
Alongi DM (2020). Nitrogen cycling and mass balance in the world's mangrove forests. Nitrogen 1, 167–189. doi: 10.3390/nitrogen1020014.
Balasubramanian B, Benit N, Agastian P, et al. (2021). Carbapenemases producing Klebsiella pneumoniae from the pus of hospitalized patients: In-vitro antibiotic properties of Streptomyces against multidrug resistant infectious bacteria. Journal of Infection and Public Health 14, 892–897. doi: 10.1016/j.jiph.2021.05.006.
Baskaran B, Muthukumarasamy A (2017). Isolation, characterisation and enzymatic activity of Streptomyces sp. and its pH control during fermentation process. IET Systems Biology 11, 114–118. doi: 10.1049/iet-syb.2016.0048.
Chater KF (2016). Recent advances in understanding Streptomyces. F1000Research 5, 2795. doi: 10.12688/f1000research.9534.1.
Chrisyariati I, Hendrarto B, Suryanti (2014). Kandungan nitrogen total dan fosfat sedimen mangrove pada umur yang berbeda di lingkungan pertambakan Mangunharjo, Semarang. Management of Aquatic Resources Journal (MAQUARES) 3, 65–72. doi: 10.14710/marj. v3i3.5623.
Constance A, Oehri J, Bunbury N, et al (2022). Soil nutrient content and water level variation drive mangrove forest aboveground biomass in the lagoonal ecosystem of Aldabra Atoll. Ecological Indicators 143, 109292. doi: 10.1016/j.ecolind. 2022.109292.
Fathoni, MM, Isnaeni I, Darmawati, A. (2021) Anti-bacterial activity of rosela flower extract (Hibiscus sabdariffa L.) against extended-spectrum beta-lactamase (ESBL) Eschericia coli. Berkala Ilmiah Kimia Farmasi 8, 7–13. doi: 10.20473/bikfar.v8i1.31204.
Frederika YC, Ihsan YN, Riyantini I (2021). Nutrient profile and mangrove vegetation composition in the Coastal waters of Indramayu. Spermonde: Jurnal Ilmu Kelautan. doi: 10.20956/jiks.v7i1.12879.
Girkin J (2019). A practical guide to optical microscopy. CRC Press. Available at: https://www.taylorfrancis.com/books/9781351630368.
Karthik Y, Kalyani MI (2023). Occurrence of Streptomyces tauricus in mangrove soil of Mangalore region in Dakshina Kannada as a source for antimicrobial peptide. Journal of Basic Microbiology 63, 389–403. doi: 10.1002/jobm.202200108.
Kumar PS, Duraipandiyan V, Ignacimuthu S (2014). Isolation, screening and partial purification of antimicrobial antibiotics from soil Streptomyces sp. SCA 7. The Kaohsiung Journal of Medical Sciences 30, 435–446. doi: 10.1016/j.kjms.2014.05.006.
Madigan MT, Bender KS, Buckley DH, et al (2019). Brock Biology of Microorganisms15th edition, 15th edn. Pearson.
Manteca Á, Yagüe P (2018). Streptomyces differentiation in liquid cultures as a trigger of secondary metabolism. Antibiotics 7, 41. doi: 10.3390/antibiotics7020041.
Martinez JPF, Rodriguez DG, Garcia ER, et al (2014). Streptomycin hydrazone derivatives: Synthesis and molecular recognition in aqueous solution. Natural Product Communications 9, 1449-1455. doi:10.1177/1934578X1400901012.
Moradali MF, Ghods S, Rehm BHA (2017). Pseudomonas aeruginosa lifestyle: A paradigm for adaptation, survival, and persistence. Frontiers in Cellular and Infection Microbiology. doi: 10.3389/fcimb.2017.00039.
Palla MS, Guntuku GS, Muthyala MKK, et al (2018). Isolation and molecular characterization of antifungal metabolite producing actinomycete from mangrove soil. Beni-Suef University Journal of Basic and Applied Sciences 7, 250–256. doi: 10.1016/j.bjbas.2018.02.006.
Percival SL, Williams DW (2014). Escherichia coli. In Microbiology of Waterborne Diseases, pp. 89–117. Elsevier. Available at: https://linkinghub. elsevier.com/retrieve/pii/B9780124158467000068.
Rütten A, Kirchner T, Musiol-Kroll EM (2022). Overview on strategies and assays for antibiotic discovery. Pharmaceuticals 15, 1302. doi: 10.33 90/ph15101302.
Ryandini D, Radjasa OK, Oedjijono (2021). Bioactive compounds derived from Streptomyces sp. SA32: antibacterial activity, chemical profile, and their related genes. IOP Conference Series: Earth and Environmental Science 948, 012062. doi: 10.1088/1755-1315/948/1/012062.
Sukojo BM, Arindi YN (2019). Study of potentials economic valuation of mangrove ecosystem for coastal communities using satellite imagery (case study: East Coastal Surabaya). IOP Conference Series: Earth and Environmental Science 389, 012013. doi: 10.1088/1755-1315/389/1/012013.
Syamsu IF, Nugraha A zaky, Nugraheni CT, et al (2018). Kajian perubahan tutupan lahan di ekosistem mangrove pantai timur Surabaya. Media Konservasi 23, 122–131. doi: 10.29244/medkon.23.2.122-131.
Tong SYC, Davis JS, Eichenberger E, et al. (2015). Staphylococcus aureus infections: Epidemiology, pathophysiology, clinical manifestations, and management. Clinical Microbiology Reviews 28, 603–661. doi: 10.1128/CMR.00134-14.
Worthington TA, zu Ermgassen PSE, Friess DA, et al (2020). A global biophysical typology of mangroves and its relevance for ecosystem structure and deforestation. Scientific Reports10, 14652. doi: 10.1038/s41598-020-71194-5.