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The Numerical Phenetic of Taxonomy Vibrio in Shellfish (Meretrix meretrix) at Edu-Tourism Mangrove Cengkrong Beach Trenggalek
Corresponding Author(s) : Burhanuddin Ihsan
Jurnal Ilmiah Perikanan dan Kelautan,
Vol. 12 No. 2 (2020): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Abstract
Highlight
- Identify the Vibrio bacteria
- Diversity of shellfish Vibrio bacteria (Meretrix Meretrix)
- Relationship similarity of Vibrio bacteria with MVSP 3.1 Program produces Dendogram
Abstract
Meretrix meretrix is one type of shellfish that is potential, and economic value, which high animal protein content as well as seafood that is widely consumed in Indonesia. This study aims to determine the diversity and similarity of Vibrio in M. meretrix at eduwisata mangrove Cengkrong Beach, Trenggalek. Isolation and identification of Vibrio was conducted by using the media TCBSA (Thiosulfate Citrate Bile Salt Sucrose Agar) streat plate through morphological observation, physiological and biochemical tests based Bergey's Manual of Systematic Bacteriology conducted in the laboratory of Microbiology Faculty of Biology, Universitas Gajah Mada. Data analysis was performed using the MVSP (Multivariate Statistical Package) 3.1 in the form of a dendrogram showing the similarity relationship Vibrio bacteria. The results of the identification of Vibrio bacteria in M. Meretrix are V. herveyi, V. parahemolyticus, V. nereis and V. proteolyticus. V. herveyi has similarities with V. parahemolyticus 66% and 62% with V. proteolyticus while with V. nereis bacterium 54%.
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- Arnanda, A. D., Ambariyanto, A., & Ridlo, A. (2005). Fluktuasi kandungan proksimat kerang bulu (Anadara inflata Reeve) di perairan pantai Semarang. Indonesian Journal of Marine Sciences, 10(2): 78-84.
- Dransfield, J., Uhl, N. W., Asmussen, C. B., Baker, W.J., Harley, M. M., & Lewis, C. E. (2005). A new phylogenetic classification of the palm family, Arecaceae. Kew Bulletin, 60: 559-569.
- Holt, J. G., Kreigh, N. R., Sneath, P. H. A., Stanley, J. T., & Williams, S.T. (1994). Bergey's manu- al of determinative bacteriology ninth edition. Baltimore: Williams and Wilikins.
- Ihsan, B., & Retnaningrum, E. (2017). Isolasi dan iden- tifikasi bakteri Vibrio sp. pada kerang kepah (Meretrix meretrix) di Kabupaten Trenggalek. Jurnal Harpodon Borneo, 10(1): 23-27.
- Kovach, W. L. (2007). MVSP – A multi variate statistical package for Windows, Ver.3.1. Pentraeth, Wales, U.K: Kovach Computing Services.
- Krieg, N. R., & Holt, J. G. (1984). Bergey's manual of systematic bacteriology, 1st Ed., Vol. 1, Baltimore: The Williams & Wilkins Co.
- Mailoa, M. N., & Setha, B. (2011). Karakteristik patogenitas Vibrio sp. diisolasi dari lendir sidat (Anguilla Sp.). Molluca Medica, 4(1): 42-48.
- Nybakken, J. W. (1992). Biologi laut pendekatan ekologis. Jakarta: Penerbit Gramedia.
- Ochman, H. (2005). Genomes on the shrink. Proc- cedings of The National Academy of Sciences of the United States of America, 102(34): 11959 – 11960.
- Onarheim, A. M., Wiik, R., Burghardt, J., & Stacke- brandt, E. (1994). Characterization and identification of two Vibrio species indigenous to the intestine of fish in cold sea water; description of Vibrio iliopiscarius sp. nov. Systematic and Applied of Microbiology, 17(3): 370-379.
- Priest, F. G., & Goodfellow, M. (2000). Applied microbial systematic. Dordrecht Netherland: Springer.
- Sneath, P. H. A., & Johnson, R. (1972). The influence on numerical taxonomic similarities of errors in microbiological tests. Journal of General Microbiology, 72: 377-392.
- Sneath, P. H. A., Mair, N. S, Sharpe, M. E. &. Holt, J.G. (1986). Bergey's manual of systematic bacteriology. Vol. 2. Baltimore: William & Wilkins.
- Sneath, P. H. A., & Sokal, R.R. (1973). Numerical taxonomy. San Francisco: W. H. Freeman and Co.
- Sokal, R. R., & Michener, C.D. (1958). A statistical method for evaluating systematic relationships. The University of Kansas Science Bulletin. 38:1409-1438.
- Suharni, T. T., Nastiti, S. J., & Soetarto, A. E. S. (2008). Mikrobiologi umum. Yogyakarta: Universitas Atma Jaya.
- Widowati, R. (2008). Keberadaan bakteri Vibrio parahaemolyticus pada udang yang dijual di rumah makan kawasan Pantai Pangandaran. VIS VITALIS, 1(1): 9-14.
References
Arnanda, A. D., Ambariyanto, A., & Ridlo, A. (2005). Fluktuasi kandungan proksimat kerang bulu (Anadara inflata Reeve) di perairan pantai Semarang. Indonesian Journal of Marine Sciences, 10(2): 78-84.
Dransfield, J., Uhl, N. W., Asmussen, C. B., Baker, W.J., Harley, M. M., & Lewis, C. E. (2005). A new phylogenetic classification of the palm family, Arecaceae. Kew Bulletin, 60: 559-569.
Holt, J. G., Kreigh, N. R., Sneath, P. H. A., Stanley, J. T., & Williams, S.T. (1994). Bergey's manu- al of determinative bacteriology ninth edition. Baltimore: Williams and Wilikins.
Ihsan, B., & Retnaningrum, E. (2017). Isolasi dan iden- tifikasi bakteri Vibrio sp. pada kerang kepah (Meretrix meretrix) di Kabupaten Trenggalek. Jurnal Harpodon Borneo, 10(1): 23-27.
Kovach, W. L. (2007). MVSP – A multi variate statistical package for Windows, Ver.3.1. Pentraeth, Wales, U.K: Kovach Computing Services.
Krieg, N. R., & Holt, J. G. (1984). Bergey's manual of systematic bacteriology, 1st Ed., Vol. 1, Baltimore: The Williams & Wilkins Co.
Mailoa, M. N., & Setha, B. (2011). Karakteristik patogenitas Vibrio sp. diisolasi dari lendir sidat (Anguilla Sp.). Molluca Medica, 4(1): 42-48.
Nybakken, J. W. (1992). Biologi laut pendekatan ekologis. Jakarta: Penerbit Gramedia.
Ochman, H. (2005). Genomes on the shrink. Proc- cedings of The National Academy of Sciences of the United States of America, 102(34): 11959 – 11960.
Onarheim, A. M., Wiik, R., Burghardt, J., & Stacke- brandt, E. (1994). Characterization and identification of two Vibrio species indigenous to the intestine of fish in cold sea water; description of Vibrio iliopiscarius sp. nov. Systematic and Applied of Microbiology, 17(3): 370-379.
Priest, F. G., & Goodfellow, M. (2000). Applied microbial systematic. Dordrecht Netherland: Springer.
Sneath, P. H. A., & Johnson, R. (1972). The influence on numerical taxonomic similarities of errors in microbiological tests. Journal of General Microbiology, 72: 377-392.
Sneath, P. H. A., Mair, N. S, Sharpe, M. E. &. Holt, J.G. (1986). Bergey's manual of systematic bacteriology. Vol. 2. Baltimore: William & Wilkins.
Sneath, P. H. A., & Sokal, R.R. (1973). Numerical taxonomy. San Francisco: W. H. Freeman and Co.
Sokal, R. R., & Michener, C.D. (1958). A statistical method for evaluating systematic relationships. The University of Kansas Science Bulletin. 38:1409-1438.
Suharni, T. T., Nastiti, S. J., & Soetarto, A. E. S. (2008). Mikrobiologi umum. Yogyakarta: Universitas Atma Jaya.
Widowati, R. (2008). Keberadaan bakteri Vibrio parahaemolyticus pada udang yang dijual di rumah makan kawasan Pantai Pangandaran. VIS VITALIS, 1(1): 9-14.